BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018G10LP1|AL427378
(905 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1302 1367 0.0
>3x_Contig1302
Length = 5215
Score = 1367 bits (669), Expect = 0.0
Identities = 736/779 (94%)
Strand = Plus / Plus
Query: 1 acagataattcaacgagaccaaaaagaaaaattgggatgagagtggactaaccaaaaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3059 acagataattcaacgagaccaaaaagaaaaattgggatgagagtggactaaccaaaaaaa 3118
Query: 61 aaagaacattgcagcctctcccaaccagactagaactccgcatcctgtataatggagtta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3119 aaagaacattgcagcctctcccaaccagactagaactccgcatcctgtataatggagtta 3178
Query: 121 cacaacaatctggaagtgacccctctatgtttttctactctccacctggaatactgtgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3179 cacaacaatctggaagtgacccctctatgtttttctactctccacctggaatactgtgct 3238
Query: 181 gtttcagttgatgtgctcattttttttttgcattggtcttagtcgttacccaatttcaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3239 gtttcagttgatgtgctcattttttttttgcattggtcttagtcgttacccaatttcaag 3298
Query: 241 aataactggaaaaatttggcaatcggacccctccacacgatgcattttagttggatggtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3299 aataactggaaaaatttggcaatcggacccctccacacgatgcattttagttggatggtt 3358
Query: 301 gaaatgagatggtgctcgttccgatgattagtccaggaatcgggcattgacggttgccga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3359 gaaatgagatggtgctcgttccgatgattagtccaggaatcgggcattgacggttgccga 3418
Query: 361 gttgtgcatcactacgggtttgatgtagaaactccgattttacatcgggtagactttggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3419 gttgtgcatcactacgggtttgatgtagaaactccgattttacatcgggtagactttggg 3478
Query: 421 gagattttgttctttctgctctcagtgatttttcaaatttaggttggtgaagcgggggcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3479 gagattttgttctttctgctctcagtgatttttcaaatttaggttggtgaagcgggggcg 3538
Query: 481 ggggagagctgttagagatggctcggaattttcctgggcacccaccccctttattttttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3539 ggggagagctgttagagatggctcggaattttcctgggcacccaccccctttattttttc 3598
Query: 541 ttgaaacgtaccatactgagtggaagtggtatagtgtaatatggcataataagagaaaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3599 ttgaaacgtaccatactgagtggaagtggtatagtgtaatatggcataataagagaaaga 3658
Query: 601 gagggaaacgaaaaaaaaataaataaaaaaaccgggaaattattcgtctagagtgacgtk 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3659 gagggaaacgaaaaaaaaataaataaaaaaaccgggaaattattcgtctagagtgacgtg 3718
Query: 661 akkkktakcaakccccacacknankagcckkacacaaakakakcakkaaakakkkkkkcc 720
| || ||| |||||||| | | || ||||||| | | || || | ||
Sbjct: 3719 aggggtagcaagccccacacgtatgatccggacacaaagagagcagtaatgagtggtgcc 3778
Query: 721 aaaacawktacacaaaaaakawccytmcccawtcyttctttaaacattaaccaaccacc 779
|| ||| |||||||| | | || | |||| || ||| ||||| || |||||||||
Sbjct: 3779 aatacatgtacacaaatattatcctttcccattctttcgggaaacagtatccaaccacc 3837
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.42 0.717 1.34
Gapped
Lambda K H
1.42 0.717 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,984
Number of Sequences: 1807
Number of extensions: 10984
Number of successful extensions: 436
Number of sequences better than 1.0e-20: 1
length of query: 905
length of database: 10,358,551
effective HSP length: 16
effective length of query: 889
effective length of database: 10,329,639
effective search space: 9183049071
effective search space used: 9183049071
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.6 bits)
S1: 11 (23.0 bits)
S2: 49 (100.6 bits)